-
infmt
javax.swing.JComboBox<E> infmt
the input format for the graphs
-
subfmt
javax.swing.JComboBox<E> subfmt
the output format for the substructures
-
seedfmt
javax.swing.JComboBox<E> seedfmt
the seed format
-
datname
javax.swing.JTextField datname
the name of the input file
-
subname
javax.swing.JTextField subname
the name of the substructure output file
-
idsname
javax.swing.JTextField idsname
the name of the graph identifier file
-
seed
javax.swing.JTextField seed
the seed structure to start the search from
-
thresh
javax.swing.JTextField thresh
the threshold for the split
-
invert
javax.swing.JCheckBox invert
whether to invert the split
-
minsize
javax.swing.JSpinner minsize
the minimal size of a substructure
-
maxsize
javax.swing.JSpinner maxsize
the maximal size of a substructure
-
extype
javax.swing.JTextField extype
the excluded node types
-
exseed
javax.swing.JTextField exseed
the node types that are excluded for seeds
-
minsupp
javax.swing.JTextField minsupp
the minimal support in the focus
-
maxsupp
javax.swing.JTextField maxsupp
the maximal support in the complement
-
abssupp
javax.swing.JCheckBox abssupp
whether to interpret the support as absolute numbers
-
supptype
javax.swing.JComboBox<E> supptype
the support type
-
greedy
javax.swing.JCheckBox greedy
whether to use greedy algorithm for MIS computation
-
closed
javax.swing.JCheckBox closed
whether to restrict the output to closed substructures
-
splbls
javax.swing.JLabel[] splbls
the labels that can be disabled in the tab
-
bdarom
javax.swing.JComboBox<E> bdarom
how to treat aromatic bonds
-
bdtype
javax.swing.JComboBox<E> bdtype
whether to ignore the bond type
-
attype
javax.swing.JComboBox<E> attype
whether to ignore the atom type
-
charge
javax.swing.JCheckBox charge
whether to match the atom charge
-
atarom
javax.swing.JCheckBox atarom
whether to match the atom aromaticity
-
kekule
javax.swing.JCheckBox kekule
whether to convert Kekule representations
-
rings
javax.swing.JCheckBox rings
whether to mark rings
-
minring
javax.swing.JSpinner minring
the minimal size of a ring
-
maxring
javax.swing.JSpinner maxring
the maximal size of a ring
-
ringext
javax.swing.JComboBox<E> ringext
the type of ring extensions
-
chains
javax.swing.JCheckBox chains
whether to find variable length carbon chains
-
rclbls
javax.swing.JLabel[] rclbls
the labels that can be disabled in the tab
-
exttype
javax.swing.JComboBox<E> exttype
the extension type
-
perfect
javax.swing.JComboBox<E> perfect
whether to do perfect extension pruning
-
equiv
javax.swing.JCheckBox equiv
whether to do equivalent sibling pruning
-
canonic
javax.swing.JCheckBox canonic
whether to do canonical form pruning
-
orbits
javax.swing.JCheckBox orbits
whether to do filter with node orbits
-
level
javax.swing.JSpinner level
the level from which to use embeddings
-
maxepg
javax.swing.JSpinner maxepg
the maximal number of embeddings per graph
-
unembed
javax.swing.JCheckBox unembed
whether to unembed siblings of the current search tree node
-
normal
javax.swing.JCheckBox normal
whether to normalize the output
-
verbose
javax.swing.JCheckBox verbose
whether to do verbose message output
-
pane
javax.swing.JTabbedPane pane
the pane for the parameter tabs
-
exec
javax.swing.JButton exec
the execute/abort button
-
stat
javax.swing.JTextField stat
the status line
-
owner
java.awt.Component owner
the owner of this dialog box
-
isprog
boolean isprog
whether started as a stand-alone program
-
chooser
javax.swing.JFileChooser chooser
the file chooser for selecting the input and output files
-
thread
java.lang.Thread thread
the substructure miner thread
-
timer
javax.swing.Timer timer
the timer for updating the progress information
-
running
boolean running
whether the miner is currently running
-
aborted
boolean aborted
whether the miner has been aborted
-
miner
Miner miner
the current substructure miner
-
start
long start
the start time for the miner thread
-
buf
java.lang.StringBuffer buf
the buffer for reading the configuration file